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1

Single-Molecule Imaging on Living Bacterial Cell Surface by High-Speed AFM

Hayato Yamashita, Azuma Taoka, Takayuki Uchihashi, Tomoya Asano, Toshio Ando, Yoshihiro Fukumori

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 1.25 MB

english, 2012

2

Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin †‡

Numoto, Nobutaka, Nakagawa, Taro, Kita, Akiko, Sasayama, Yuichi, Fukumori, Yoshihiro, Miki, Kunio

Journal:

Year:

2008

Language:

english

File:

PDF, 5.77 MB

english, 2008

3

Live-Cell Imaging of Bacterial Cells Using High-Speed Atomic Force Microscopy

Taoka, Azuma, Fukumori, Yoshihiro

Year:

2015

File:

PDF, 1.30 MB

2015

4

Preparation of subunits of flavocytochromes c derived from Chlorobium limicola f. thiosulfatophilum and Chromatium vinosum

Tateg Yamanaka, Yoshihiro Fukumori, Kazuo Okunuki

Journal:

Analytical Biochemistry

Year:

1979

Language:

english

File:

PDF, 398 KB

english, 1979

5

Crystallization and preliminary X-ray crystallographic analysis of extracellular giant hemoglobin from pogonophoran Oligobrachia mashikoi

Nobutaka Numoto, Taro Nakagawa, Akiko Kita, Yuichi Sasayama, Yoshihiro Fukumori, Kunio Miki

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2005

Language:

english

File:

PDF, 1.04 MB

english, 2005

6

Corrigendum to: “Crystallization and preliminary X-ray crystallographic analysis of extracellular giant hemoglobin from pogonophoran Oligobrachia mashikoi” [Biochim. Biophys. Acta 1750 (2005) 173–176]

Nobutaka Numoto, Taro Nakagawa, Akiko Kita, Yuichi Sasayama, Yoshihiro Fukumori, Kunio Miki

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2006

Language:

english

File:

PDF, 54 KB

english, 2006

7

Heme-copper oxidase family structure of Magnetospirillum magnetotacticum ‘cytochrome a1’-like hemoprotein without cytochrome c oxidase activity

Yu-suke Tanimura, Yoshihiro Fukumori

Journal:

Journal of Inorganic Biochemistry

Year:

2000

Language:

english

File:

PDF, 593 KB

english, 2000

8

Probing protein-cofactor interactions in the terminal oxidases by second derivative spectroscopy: Study of bacterial enzymes with cofactor substitutions and heme a model compounds

Jason S. Felsch, Martin P. Horvath, Susan Gursky, Michael R. Hobaugh, Paul N. Goudreau, James A. Fee, William T. Morgan, Suzanne J. Admiraal, Masao Ikeda-Saito, Taketomo Fujiwara, Yoshihiro Fukumori,

Journal:

Protein Science

Year:

1994

Language:

english

File:

PDF, 690 KB

english, 1994

9

Structure of the partially unliganded met state of 400 kDa hemoglobin: Insights into ligand-induced structural changes of giant hemoglobins

Nobutaka Numoto, Taro Nakagawa, Akiko Kita, Yuichi Sasayama, Yoshihiro Fukumori, Kunio Miki

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 1.96 MB

english, 2008

10

The amino acid sequence ofNitrosomonas europaeacytochromec-552

Taketomo Fujiwara, Tateo Yamanaka, Yoshihiro Fukumori

Journal:

Current Microbiology

Year:

1995

Language:

english

File:

PDF, 420 KB

english, 1995

11

Reactivity of theco-type andbaa3-type cytochromecoxidases fromPseudomonas aeruginosawith different endogenous cytochromesc

Atsushi Okamoto, Taketomo Fujiwara, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Current Microbiology

Year:

1995

Language:

english

File:

PDF, 340 KB

english, 1995

12

Purification of cytochromea1c1fromNitrobacter agilisand characterization of nitrite oxidation system of the bacterium

Yoshikazu Tanaka, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Archives of Microbiology

Year:

1983

Language:

english

File:

PDF, 843 KB

english, 1983

13

Bacterial NADH-quinone oxidoreductases: Iron-sulfur clusters and related problems

Vladimir D. Sled', Thorsten Friedrich, Hans Leif, Hanns Weiss, Steven W. Meinhardt, Yoshihiro Fukumori, Melissa W. Calhoun, Robert B. Gennis, Tomoko Ohnishi

Journal:

Journal of Bioenergetics and Biomembranes

Year:

1993

Language:

english

File:

PDF, 789 KB

english, 1993

14

A relationship between prokaryote and eukaryote observed inNitrobacter agiliscytochromesaa3andC

Tateo Yamanaka, Yoshihiro Fukumori, Yoshikazu Tanaka

Journal:

Origins of Life and Evolution of Biospheres

Year:

1984

Language:

english

File:

PDF, 390 KB

english, 1984

15

Cytochromebcpurified from the methanogenMethanosarcina barkeri

Youichi Kumazawa, Taketomo Fujiwara, Yoshihiro Fukumori, Yosuke Koga, Tateo Yamanaka

Journal:

Current Microbiology

Year:

1994

Language:

english

File:

PDF, 356 KB

english, 1994

16

A high-potential nonheme iron protein (HiPIP)-linked, thiosulfate-oxidizing enzyme derived fromChromatium vinosum

Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Current Microbiology

Year:

1979

Language:

english

File:

PDF, 506 KB

english, 1979

17

Identification of Iron Transporters Expressed in the Magnetotactic BacteriumMagnetospirillum magnetotacticum

Azuma Taoka, Chihiro Umeyama, Yoshihiro Fukumori

Journal:

Current Microbiology

Year:

2009

Language:

english

File:

PDF, 306 KB

english, 2009

18

Characterization of Mediterranean magnetotactic bacteria

Christopher Lefèvre, Alain Bernadac, Nathalie Pradel, Longfei Wu, Kui Yu-Zhang, Tian Xiao, Jean-Paul Yonnet, Afef Lebouc, Tao Song, Yoshihiro Fukumori

Journal:

Journal of Ocean University of China

Year:

2007

Language:

english

File:

PDF, 728 KB

english, 2007

19

A comparative survey of several bacterial aa3-type cytochrome c oxidases

Tateo Yamanaka, Yoshihiro Fukumori, Takeshi Yamazaki, Hiroshi Kato, Koji Nakayama

Journal:

Journal of Inorganic Biochemistry

Year:

1985

Language:

english

File:

PDF, 323 KB

english, 1985

20

The nitrite oxidizing system of Nitrobacter winogradskyi

Tateo Yamanaka, Yoshihiro Fukumori

Journal:

FEMS Microbiology Letters

Year:

1988

Language:

english

File:

PDF, 949 KB

english, 1988

21

Fe(II)-oxidizing enzyme purified from Thiobacillus ferrooxidans

Yoshihiro Fukumori, Takahiro Yano, Akihiko Sato, Tateo Yamanaka

Journal:

FEMS Microbiology Letters

Year:

1988

Language:

english

File:

PDF, 231 KB

english, 1988

22

Purification and some properties of thiosulphate-cleaving enzyme from Thiobacillus novellus

Yoshihiro Fukumori, Kazuya Hoshiko, Tateo Yamanaka

Journal:

FEMS Microbiology Letters

Year:

1989

Language:

english

File:

PDF, 302 KB

english, 1989

23

Purification and characterization of ATPase from Nitrobacter winogradskyi

Tadashi Hara, Annabelle P. Villobos, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

FEMS Microbiology Letters

Year:

1991

Language:

english

File:

PDF, 292 KB

english, 1991

24

Oxygen concentration-dependent induction of a 140-kDa protein in magnetic bacterium Magnetospirillum magnetotacticum MS-1

Hajime Sakaguchi, Hiromi Hagiwara, Yoshihiro Fukumori, Yutaka Tamaura, Minoru Funaki, Shigehisa Hirose

Journal:

FEMS Microbiology Letters

Year:

1993

Language:

english

File:

PDF, 421 KB

english, 1993

25

Purification and characterization of membrane-bound CO-reactive hemoprotein from Tetrahymena pyriformis mitochondria

Akihiro Inokuchi, Yoshihiro Fukumori

Journal:

FEMS Microbiology Letters

Year:

1993

Language:

english

File:

PDF, 350 KB

english, 1993

26

Two membrane-bound c-type cytochromes of Thiobacillus ferrooxidans: Purification and properties

Hideyuki Tamegai, Masahiro Kai, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

FEMS Microbiology Letters

Year:

1994

Language:

english

File:

PDF, 438 KB

english, 1994

27

Purification and characterization of triheme cytochrome c7 from the metal-reducing bacterium, Geobacter metallireducens

Eman Afkar, Yoshihiro Fukumori

Journal:

FEMS Microbiology Letters

Year:

1999

Language:

english

File:

PDF, 269 KB

english, 1999

28

Molecular aspects of the electron transfer system which participates in the oxidation of ferrous ion by Thiobacillus ferrooxidans

Tateo Yamanaka, Yoshihiro Fukumori

Journal:

FEMS Microbiology Reviews

Year:

1995

Language:

english

File:

PDF, 864 KB

english, 1995

29

The 2.8 Å structure of hydroxylamine oxidoreductase from a nitrifying chemoautotrophic bacterium, Nitrosomonas europaea

Igarashi, Noriyuki, Moriyama, Hideaki, Fujiwara, Taketomo, Fukumori, Yoshihiro, Tanaka, Nobuo

Journal:

Natural Structural Biology

Year:

1997

File:

PDF, 1.39 MB

1997

30

Direct Evidence That Extracellular Giant Hemoglobin is Produced in Chloragogen Tissues in a Beard Worm, Oligobrachia mashikoi (Frenulata, Siboglinidae, Annelida)

Nakahama, Shigeyuki, Nakagawa, Taro, Kanemori, Masaaki, Fukumori, Yoshihiro, Sasayama, Yuichi

Journal:

Zoological Science

Year:

2008

Language:

english

File:

PDF, 916 KB

english, 2008

31

Locomotor dysfunction and risk of cardiovascular disease, quality of life, and medical costs: design of the Locomotive Syndrome and Health Outcome in Aizu Cohort Study (LOHAS) and baseline characteristics of the study population

Koji Otani, Misa Takegami, Norio Fukumori, Miho Sekiguchi, Yoshihiro Onishi, Shin Yamazaki, Rei Ono, Kenichi Otoshi, Yasuaki Hayashino, Shunichi Fukuhara, Shin-ichi Kikuchi, Shin-ichi Konno

Journal:

Journal of Orthopaedic Science

Year:

2012

Language:

english

File:

PDF, 269 KB

english, 2012

32

The complete amino acid sequence of Nitrobacter agilis cytochrome c-550

Yoshikazu Tanaka, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1982

Language:

english

File:

PDF, 492 KB

english, 1982

33

Cytochrome c′-type cytochrome-c peroxidase derived from Nitrosomonas europaea

Takeshi Yamazaki, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1986

Language:

english

File:

PDF, 651 KB

english, 1986

34

Molecular aspects of the electron transfer system which participates in the oxidation of ferrous ion by Thiobacillus ferrooxidans

Tateo Yamanaka, Yoshihiro Fukumori

Journal:

FEMS Microbiology Reviews

Year:

1995

Language:

english

File:

PDF, 885 KB

english, 1995

35

Occurrence of d-amino acids in a few archaea and dehydrogenase activities in hyperthermophile Pyrobaculum islandicum

Yoko Nagata, Kimihiro Tanaka, Teruhito Iida, Yoshio Kera, Ryo-hei Yamada, Yasuhiro Nakajima, Taketomo Fujiwara, Yoshihiro Fukumori, Tateo Yamanaka, Yosuke Koga, Satoru Tsuji, Kumiko Kawaguchi-Nagata

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1999

Language:

english

File:

PDF, 164 KB

english, 1999

36

Nitrite Reductase from the Magnetotactic Bacterium Magnetospirillum magnetotacticum : A Novel Cytochrome cd1 with Fe(II): Nitrite Oxidoreductase Activity

Takehiro Yamazaki, Hiroyuki Oyanagi, Taketorao Fujiwara, Yoshihiro Fukumori

Journal:

Year:

1995

Language:

english

File:

PDF, 811 KB

english, 1995

37

Effect of cardiolipin on the enzymatic activity of Nitrobacter agilis cytochrome c oxidase

Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1982

Language:

english

File:

PDF, 468 KB

english, 1982

38

Cytochrome a1 of Nitrosomonas europaea resembles aa3-type cytochrome c oxidase in many respects

Takeshi Yamazaki, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1985

Language:

english

File:

PDF, 1.07 MB

english, 1985

39

Acceleration of the oxygen reaction in CuA-deficient Nitrosomonas europaea cytochrome c oxidase as revealed by the flow-flash measurement

Yutaka Orii, Takeshi Sakamoto, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochemical and Biophysical Research Communications

Year:

1992

Language:

english

File:

PDF, 353 KB

english, 1992

40

Thiobacillus novellus cytochrome oxidase can separate some eucaryotic cytochromes c

Tateo Yamanaka, Yoshihiro Fukumori

Journal:

Year:

1977

Language:

english

File:

PDF, 369 KB

english, 1977

41

Two Km values for cytochrome c of aa3-type two-subunit cytochrome c oxidase from Nitrobacter agilis

Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Year:

1984

Language:

english

File:

PDF, 320 KB

english, 1984

42

The amino acid sequence of rusticyanin isolated from Thiobacillus ferrooxidans

Takahiro Yano, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Year:

1991

Language:

english

File:

PDF, 416 KB

english, 1991

43

Purification, and some molecular and enzymatic features of a novel ccb-type cytochrome c oxidase from a microaerobic denitrifier, Magnetospirillum magnetotacticum

Hideyuki Tamegai, Yoshihiro Fukumori

Journal:

Year:

1994

Language:

english

File:

PDF, 417 KB

english, 1994

44

Cloning and sequencing of a gene encoding a new member of the tetratricopeptide protein family from magnetosomes of Magnetospirillum magnetotacticum

Yoshihiro Okuda, Kimitoshi Denda, Yoshihiro Fukumori

Journal:

Year:

1996

Language:

english

File:

PDF, 397 KB

english, 1996

45

Participation of nitric oxide reductase in survival of Pseudomonas aeruginosa in LPS-activated macrophages

Kohei Kakishima, Akiko Shiratsuchi, Azuma Taoka, Yoshinobu Nakanishi, Yoshihiro Fukumori

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 253 KB

english, 2007

46

Oxygenation properties of extracellular giant hemoglobin from Oligobrachia mashikoi

Yayoi Aki, Taro Nakagawa, Masako Nagai, Yuichi Sasayama, Yoshihiro Fukumori, Kiyohiro Imai

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 233 KB

english, 2007

47

Cytochromes c of Nitrobacter winogradskyi and Thiobacillus novellus: structure, function and evolution

Tateo Yamanaka, Tsutomu Nagano, Kazuo Shoji, Yoshihiro Fukumori

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1991

Language:

english

File:

PDF, 402 KB

english, 1991

48

Nitrobacter winogradskyi cytochrome b-559: a nonhaem iron-containing cytochrome related to bacterioferritin

Toshihisa Kurokawa, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1989

Language:

english

File:

PDF, 374 KB

english, 1989

49

Thiobacillus ferrooxidans cytochrome c-552: purification and some of its molecular features

Akihiko Sato, Yoshihiro Fukumori, Takahiro Yano, Masahiro Kai, Tateo Yamanaka

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

1989

Language:

english

File:

PDF, 472 KB

english, 1989

50

Molecular cloning of the cytochrome aa3 gene from the archaeon (Archaebacterium) Halobacterium halobium

Kimitoshi Denda, Taketomo Fujiwara, Makoto Seki, Masasuke Yoshida, Yoshihiro Fukumori, Tateo Yamanaka

Journal:

Biochemical and Biophysical Research Communications

Year:

1991

Language:

english

File:

PDF, 406 KB

english, 1991

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